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R. norvegicus Gene: Stx4 - ENSRNOG00000019302 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000019302
NameStx4
Descriptionsyntaxin 4 [Source:RGD Symbol;Acc:621019]
OrganismRattus norvegicus (rat)
Synonym(s)stx4a
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.04e3
  • 1.04e3
96.22
  • 96.22
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.19e3
  • 1.19e3
95.66
  • 95.66
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.23e3
  • 1.23e3
95.53
  • 95.53
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.27e3
  • 1.27e3
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.31e3
  • 1.31e3
95.24
  • 95.24
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.63e3
  • 1.63e3
94.06
  • 94.06
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.72e3
  • 1.72e3
93.73
  • 93.73
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.83e3
  • 1.83e3
93.33
  • 93.33
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.86e3
  • 1.86e3
93.23
  • 93.23
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.87e3
  • 1.87e3
93.20
  • 93.20
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.87e3
  • 1.87e3
93.20
  • 93.20
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.03e3
  • 2.03e3
  • 2.35e3
92.60
  • 92.60
  • 91.46
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.04e3
  • 2.04e3
92.59
  • 92.59
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.22e3
  • 2.22e3
91.90
  • 91.90
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.23e3
  • 2.23e3
91.89
  • 91.89
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.40e3
  • 2.40e3
91.28
  • 91.28
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
2.45e3
  • 2.45e3
  • 2.63e3
  • 2.72e3
91.08
  • 91.08
  • 90.44
  • 90.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.61e3
  • 2.61e3
90.51
  • 90.51
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.80e3
  • 2.80e3
89.80
  • 89.80
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
6.31e3
  • 6.31e3
  • 6.56e3
77.03
  • 77.03
  • 76.12
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.11e3
  • 8.11e3
  • 1.18e4
70.45
  • 70.45
  • 57.10
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires5 species5 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000019302.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000019302.

Cross-references

EnsemblENSRNOG00000019302 (Stx4)
RGD621019 (Stx4)
EMBLAC111812, CH473956
Uniprot/SPTREMBLG3V8I4, G3V8I4_RAT

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