R. norvegicus Gene: Slx1b - ENSRNOG00000019369 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000019369
NameSlx1b
DescriptionSLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) [Source:RGD Symbol;Acc:1311568]
OrganismRattus norvegicus (rat)
Synonym(s)giyd1, giyd2, loc293489, lrrgt00058, mgc94602, rgd1311568, slx1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.28e3
  • 3.28e3
  • 6.47e3
88.02932
  • 88.02932
  • 76.41409
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
4.18e3
  • 4.18e3
  • 6.20e3
84.74636
  • 84.74636
  • 77.39734
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
4.71e3
  • 4.71e3
82.83496
  • 82.83496
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.56e3
  • 5.56e3
  • 6.11e3
79.74129
  • 79.74129
  • 77.73578
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.18e3
  • 6.18e3
77.47748
  • 77.47748
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.27e3
  • 6.27e3
77.12835
  • 77.12835
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
6.68e3
  • 6.68e3
75.64238
  • 75.64238
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.71e3
  • 6.71e3
75.54025
  • 75.54025
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.75e3
  • 6.75e3
75.38644
  • 75.38644
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.90e3
  • 6.90e3
74.82110
  • 74.82110
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
7.03e3
  • 7.03e3
74.36040
  • 74.36040
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.07e3
  • 7.07e3
74.19991
  • 74.19991
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.09e3
  • 7.09e3
74.14469
  • 74.14469
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.25e3
  • 7.25e3
73.57672
  • 73.57672
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.27e3
  • 7.27e3
73.48481
  • 73.48481
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.47e3
  • 7.47e3
72.77080
  • 72.77080
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.58e3
  • 7.58e3
72.35916
  • 72.35916
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.64e3
  • 7.64e3
72.13390
  • 72.13390
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
7.70e3
  • 7.70e3
71.93183
  • 71.93183
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.93e3
  • 7.93e3
  • 1.06e4
71.09822
  • 71.09822
  • 61.47996
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.98e3
  • 7.98e3
70.89182
  • 70.89182
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07005779, AY383713, BC087090
EnsemblENSRNOG00000019369 (Slx1b)
RGD1311568 (Slx1b)
Uniprot/SPTREMBLQ6TXE1, Q6TXE1_RAT
Uniprot/SWISSPROTQ5PQP5, SLX1_RAT

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