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R. norvegicus Gene: Cd9 - ENSRNOG00000019556 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000019556
NameCd9
DescriptionCD9 molecule [Source:RGD Symbol;Acc:2318]
OrganismRattus norvegicus (rat)
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
159
  • 159
99.42
  • 99.42
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
316
  • 316
98.85
  • 98.85
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
744
  • 744
97.29
  • 97.29
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
950
  • 950
96.54
  • 96.54
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
951
  • 951
96.54
  • 96.54
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.06e3
  • 1.06e3
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.18e3
  • 1.18e3
95.72
  • 95.72
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.22e3
  • 1.22e3
95.57
  • 95.57
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.23e3
  • 1.23e3
95.51
  • 95.51
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.48e3
  • 1.48e3
94.60
  • 94.60
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.52e3
  • 1.52e3
94.47
  • 94.47
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.52e3
  • 1.52e3
94.47
  • 94.47
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.54e3
  • 1.54e3
94.40
  • 94.40
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.66e3
  • 1.66e3
93.96
  • 93.96
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
2.07e3
  • 2.07e3
  • 2.27e3
92.46
  • 92.46
  • 91.73
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.32e3
  • 2.32e3
91.57
  • 91.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.36e3
  • 2.36e3
91.40
  • 91.40
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.44e3
  • 2.44e3
  • 3.23e3
91.10
  • 91.10
  • 88.23
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.22e3
  • 3.22e3
88.28
  • 88.28
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
9.02e3
  • 9.02e3
  • 9.34e3
  • 1.03e4
67.16
  • 67.16
  • 65.98
  • 62.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
  • 1.09e4
60.39
  • 60.39
  • 60.25
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000019556.

Cross-references

EnsemblENSRNOG00000019556 (Cd9)
RGD2318 (Cd9)
EMBLAABR07062037, BC161804, CH473964, X76489
Uniprot/SPTREMBLB1WBM0, B1WBM0_RAT
Uniprot/SWISSPROTCD9_RAT, P40241

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