R. norvegicus Gene: Lcat - ENSRNOG00000019573 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000019573
NameLcat
Descriptionlecithin cholesterol acyltransferase [Source:RGD Symbol;Acc:2993]
OrganismRattus norvegicus (rat)
Synonym(s)mgc108718

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
297
  • 297
  • 314
98.92
  • 98.92
  • 98.86
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.79e3
  • 2.79e3
89.82
  • 89.82
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.18e3
  • 4.18e3
  • 4.92e3
84.75
  • 84.75
  • 82.05
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
4.70e3
  • 4.70e3
82.85
  • 82.85
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.05e3
  • 5.05e3
81.60
  • 81.60
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.18e3
  • 8.18e3
70.17
  • 70.17
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.71e3
  • 8.71e3
68.22
  • 68.22
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.73e3
  • 8.73e3
68.15
  • 68.15
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.84e3
  • 8.84e3
  • 1.12e4
67.75
  • 67.75
  • 59.25
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
9.56e3
  • 9.56e3
65.12
  • 65.12
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
9.77e3
  • 9.77e3
64.35
  • 64.35
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
9.93e3
  • 9.93e3
63.80
  • 63.80
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.99e3
  • 9.99e3
63.55
  • 63.55
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.36
  • 61.36
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.60
  • 59.60
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.14
  • 59.14
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.18e4
  • 1.18e4
  • 1.24e4
56.79
  • 56.79
  • 54.69
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.47
  • 56.47
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.49
  • 55.49
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.64
  • 54.64
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.68
  • 52.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAC121465, BC091155, CH473972, U62803
EnsemblENSRNOG00000019573 (Lcat)
RGD2993 (Lcat)
Uniprot/SPTREMBLO35849, O35849_RAT

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