R. norvegicus Gene: Cpsf3l - ENSRNOG00000019712 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000019712
NameCpsf3l
Descriptioncleavage and polyadenylation specific factor 3-like [Source:RGD Symbol;Acc:1306841]
OrganismRattus norvegicus (rat)
Synonym(s)int11, ints11, loc298688, mgc124975, rgd1306841

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.83e3
  • 2.83e3
  • 4.26e3
89.66933
  • 89.66933
  • 84.47678
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.96e3
  • 3.96e3
85.57151
  • 85.57151
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.29e3
  • 4.29e3
84.33888
  • 84.33888
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
4.32e3
  • 4.32e3
84.26097
  • 84.26097
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.85e3
  • 4.85e3
  • 5.00e3
82.33140
  • 82.33140
  • 81.76682
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.86e3
  • 4.86e3
82.26648
  • 82.26648
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
5.12e3
  • 5.12e3
81.33133
  • 81.33133
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.16e3
  • 5.16e3
81.19254
  • 81.19254
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.19e3
  • 5.19e3
81.07933
  • 81.07933
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.36e3
  • 5.36e3
80.46825
  • 80.46825
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
5.36e3
  • 5.36e3
  • 5.65e3
80.46238
  • 80.46238
  • 79.39782
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
5.42e3
  • 5.42e3
80.25200
  • 80.25200
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
5.56e3
  • 5.56e3
79.72233
  • 79.72233
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.61e3
  • 5.61e3
79.52544
  • 79.52544
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
5.90e3
  • 5.90e3
78.49973
  • 78.49973
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.93e3
  • 5.93e3
78.37790
  • 78.37790
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.97e3
  • 5.97e3
78.23905
  • 78.23905
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.18e3
  • 6.18e3
77.44494
  • 77.44494
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.39e3
  • 6.39e3
76.70982
  • 76.70982
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.71e3
  • 6.71e3
75.52063
  • 75.52063
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC105303
EnsemblENSRNOG00000019712 (Cpsf3l)
RGD1306841 (Cpsf3l)
Uniprot/SWISSPROTINT11_RAT, Q3MHC2

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