R. norvegicus Gene: Stub1 - ENSRNOG00000019798 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000019798
NameStub1
DescriptionSTIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase [Source:RGD Symbol;Acc:1306167]
OrganismRattus norvegicus (rat)
Synonym(s)chip, loc287155, mgc116422

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
937
  • 937
96.50105
  • 96.50105
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.08e3
  • 1.08e3
95.96406
  • 95.96406
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.22e3
  • 1.22e3
95.44466
  • 95.44466
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.04e3
  • 2.04e3
92.38462
  • 92.38462
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.06e3
  • 2.06e3
92.31729
  • 92.31729
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.32e3
  • 2.32e3
91.33941
  • 91.33941
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.46e3
  • 2.46e3
90.81643
  • 90.81643
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
3.21e3
  • 3.21e3
88.02227
  • 88.02227
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
3.47e3
  • 3.47e3
87.05436
  • 87.05436
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07029217, CH473948
EnsemblENSRNOG00000019798 (Stub1)
RGD1306167 (Stub1)
Uniprot/SPTREMBLD4A4T0, D4A4T0_RAT

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