R. norvegicus Gene: Homer3 - ENSRNOG00000020229 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000020229
NameHomer3
Descriptionhomer scaffolding protein 3 [Source:RGD Symbol;Acc:620706]
OrganismRattus norvegicus (rat)
Synonym(s)vesl-3, vesl3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.45e3
  • 2.45e3
91.06
  • 91.06
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
3.67e3
  • 3.67e3
86.61
  • 86.61
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
5.08e3
  • 5.08e3
81.47
  • 81.47
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.64e3
  • 5.64e3
79.42
  • 79.42
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.79e3
  • 5.79e3
78.87
  • 78.87
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.80e3
  • 5.80e3
78.85
  • 78.85
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.94e3
  • 5.94e3
78.34
  • 78.34
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.21e3
  • 6.21e3
77.36
  • 77.36
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.23e3
  • 6.23e3
77.29
  • 77.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
6.58e3
  • 6.58e3
  • 8.47e3
76.01
  • 76.01
  • 69.11
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.83e3
  • 6.83e3
75.08
  • 75.08
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.86e3
  • 6.86e3
74.99
  • 74.99
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
7.23e3
  • 7.23e3
73.63
  • 73.63
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.79e3
  • 7.79e3
71.60
  • 71.60
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
8.11e3
  • 8.11e3
70.43
  • 70.43
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.53e3
  • 8.53e3
  • 9.83e3
68.89
  • 68.89
  • 64.16
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
8.86e3
  • 8.86e3
67.70
  • 67.70
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.97e3
  • 8.97e3
67.28
  • 67.28
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
  • 2.26e4
60.95
  • 60.95
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.38e4
  • 1.38e4
  • 1.39e4
49.59
  • 49.59
  • 49.37
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAB020879, AC128750, BC070922
EnsemblENSRNOG00000020229 (Homer3)
RGD620706 (Homer3)
Uniprot/SPTREMBLQ6IRH2, Q6IRH2_RAT
Uniprot/SWISSPROTHOME3_RAT, Q9Z2X5

Do not show this banner again