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R. norvegicus Gene: Rabac1 - ENSRNOG00000020233 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000020233
NameRabac1
DescriptionRab acceptor 1 (prenylated) [Source:RGD Symbol;Acc:621002]
OrganismRattus norvegicus (rat)
Synonym(s)mgc105390, pra1, praf1
Orthologs(s)21 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
158
  • 158
  • 567
99.43
  • 99.43
  • 97.94
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
421
  • 421
98.47
  • 98.47
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
431
  • 431
  • 1.24e3
98.43
  • 98.43
  • 95.49
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
453
  • 453
  • 605
98.35
  • 98.35
  • 97.80
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
630
  • 630
97.71
  • 97.71
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
878
  • 878
96.80
  • 96.80
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
920
  • 920
96.65
  • 96.65
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
993
  • 993
96.38
  • 96.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
994
  • 994
  • 999
  • 1.39e3
96.38
  • 96.38
  • 96.36
  • 94.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.01e3
  • 1.01e3
96.33
  • 96.33
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.03e3
  • 1.03e3
96.24
  • 96.24
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.07e3
  • 1.07e3
96.10
  • 96.10
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.21e3
  • 1.21e3
95.61
  • 95.61
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.24e3
  • 1.24e3
95.49
  • 95.49
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.26e3
  • 1.26e3
95.40
  • 95.40
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.33e3
  • 1.33e3
95.17
  • 95.17
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.58e3
  • 1.58e3
94.25
  • 94.25
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.62e3
  • 1.62e3
94.12
  • 94.12
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.79e3
  • 1.79e3
  • 1.85e3
93.47
  • 93.47
  • 93.25
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.40e3
  • 2.40e3
91.27
  • 91.27
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.91e3
  • 2.91e3
89.41
  • 89.41
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.38e3
  • 3.38e3
87.68
  • 87.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000020233.

Cross-references

EnsemblENSRNOG00000020233 (Rabac1)
RGD621002 (Rabac1)
EMBLAF025506, BC086387
Uniprot/SWISSPROTO35394, PRAF1_RAT

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