R. norvegicus Gene: Lgals4 - ENSRNOG00000020338 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000020338
NameLgals4
Descriptionlectin, galactoside-binding, soluble, 4 [Source:RGD Symbol;Acc:3003]
OrganismRattus norvegicus (rat)
Synonym(s)gal-4, l-36, l36lbi, l36lbp
Orthologs(s)16 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
39.3
  • 39.3
99.86
  • 99.86
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
71.9
  • 71.9
99.74
  • 99.74
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
97.5
  • 97.5
99.65
  • 99.65
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
403
  • 403
98.54
  • 98.54
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
3.57e3
  • 3.57e3
87.00
  • 87.00
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
4.34e3
  • 4.34e3
84.20
  • 84.20
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.31
  • 63.31
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
  • 1.48e4
58.06
  • 58.06
  • 45.92
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.52
  • 57.52
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
56.97
  • 56.97
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
48.05
  • 48.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
  • 1.87e4
35.05
  • 35.05
  • 31.95
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.94e4
  • 1.94e4
29.24
  • 29.24
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.95e4
  • 1.95e4
28.91
  • 28.91
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.95e4
  • 1.95e4
28.90
  • 28.90
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.21e4
  • 2.21e4
  • 2.22e4
19.54
  • 19.54
  • 19.24
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000020338.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000020338.

Cross-references

EnsemblENSRNOG00000020338 (Lgals4)
RGD3003 (Lgals4)
EMBLM73553
Uniprot/SWISSPROTLEG4_RAT, P38552

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