We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

R. norvegicus Gene: Stxbp3 - ENSRNOG00000020392 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000020392
NameStxbp3
Descriptionsyntaxin binding protein 3 [Source:RGD Symbol;Acc:619968]
OrganismRattus norvegicus (rat)
Synonym(s)mgc112606, munc-18c, munc18-c
Orthologs(s)17 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.17e3
  • 2.17e3
92.11
  • 92.11
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.94e3
  • 2.94e3
89.31
  • 89.31
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
3.00e3
  • 3.00e3
  • 3.65e3
89.07
  • 89.07
  • 86.71
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.15e3
  • 3.15e3
88.53
  • 88.53
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.32e3
  • 3.32e3
87.92
  • 87.92
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.41e3
  • 3.41e3
87.57
  • 87.57
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
3.46e3
  • 3.46e3
87.41
  • 87.41
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.48e3
  • 3.48e3
87.32
  • 87.32
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.50e3
  • 3.50e3
87.27
  • 87.27
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
3.72e3
  • 3.72e3
86.46
  • 86.46
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.76e3
  • 3.76e3
86.31
  • 86.31
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.81e3
  • 3.81e3
86.12
  • 86.12
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
3.89e3
  • 3.89e3
  • 4.64e3
  • 5.87e3
85.83
  • 85.83
  • 83.11
  • 78.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
3.92e3
  • 3.92e3
85.72
  • 85.72
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
4.00e3
  • 4.00e3
85.41
  • 85.41
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.42e3
  • 4.42e3
83.89
  • 83.89
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.45e3
  • 4.45e3
83.78
  • 83.78
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.55e3
  • 4.55e3
83.41
  • 83.41
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.24e3
  • 5.24e3
  • 7.62e3
80.93
  • 80.93
  • 72.25
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
5.62e3
  • 5.62e3
79.53
  • 79.53
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.04e3
  • 8.04e3
  • 8.94e3
70.72
  • 70.72
  • 67.44
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Glires2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000020392.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa2 genesCompare expression
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000020392.

Cross-references

EnsemblENSRNOG00000020392 (Stxbp3)
RGD619968 (Stxbp3)
EMBLAB046544, AC129843, BC098660, CH473952
Uniprot/SPTREMBLQ99PV2, Q99PV2_RAT

Do not show this banner again