R. norvegicus Gene: Klhl18 - ENSRNOG00000020880 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000020880
NameKlhl18
Descriptionkelch-like family member 18 [Source:RGD Symbol;Acc:1310570]
OrganismRattus norvegicus (rat)
Synonym(s)loc316012, rgd1310570
Orthologs(s)24 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
7.02e3
  • 7.02e3
  • 7.94e3
  • 8.63e3
74.44
  • 74.44
  • 71.06
  • 68.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.43e3
  • 7.43e3
  • 9.78e3
72.95
  • 72.95
  • 64.39
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.63e3
  • 7.63e3
72.21
  • 72.21
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.71e3
  • 7.71e3
71.91
  • 71.91
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
7.83e3
  • 7.83e3
71.48
  • 71.48
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.19e3
  • 8.19e3
  • 2.21e4
70.17
  • 70.17
  • 19.54
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.60e3
  • 8.60e3
68.69
  • 68.69
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
9.43e3
  • 9.43e3
65.65
  • 65.65
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
9.44e3
  • 9.44e3
65.62
  • 65.62
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
9.44e3
  • 9.44e3
65.62
  • 65.62
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.46e3
  • 9.46e3
65.55
  • 65.55
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
9.60e3
  • 9.60e3
65.03
  • 65.03
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.61e3
  • 9.61e3
64.98
  • 64.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.64e3
  • 9.64e3
  • 1.29e4
64.89
  • 64.89
  • 53.05
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
63.56
  • 63.56
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.73
  • 62.73
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
61.16
  • 61.16
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
60.89
  • 60.89
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.80
  • 58.80
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
50.06
  • 50.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000020880.

Paralogs (same species)

Paralogy information comes from OMA : ENSRNOG00000020880.

Cross-references

EnsemblENSRNOG00000020880 (Klhl18)
RGD1310570 (Klhl18)
EMBLAABR07071500, AABR07071501
Uniprot/SPTREMBLF1M3S0, F1M3S0_RAT

Do not show this banner again