R. norvegicus Gene: Hspb6 - ENSRNOG00000020922 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000020922
NameHspb6
Descriptionheat shock protein, alpha-crystallin-related, B6 [Source:RGD Symbol;Acc:621554]
OrganismRattus norvegicus (rat)
Synonym(s)hsp20, loc192245, p20

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
71.1
  • 71.1
99.74
  • 99.74
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
76.8
  • 76.8
99.72
  • 99.72
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
165
  • 165
99.40
  • 99.40
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
226
  • 226
99.18
  • 99.18
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.41e3
  • 1.41e3
94.85
  • 94.85
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.55e3
  • 1.55e3
94.34
  • 94.34
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.89e3
  • 1.89e3
93.13
  • 93.13
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.76e3
  • 2.76e3
89.93
  • 89.93
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.94e3
  • 2.94e3
89.28
  • 89.28
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.41e3
  • 3.41e3
87.56
  • 87.56
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
3.55e3
  • 3.55e3
87.06
  • 87.06
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.79e3
  • 3.79e3
86.19
  • 86.19
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.96e3
  • 3.96e3
85.57
  • 85.57
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.46e3
  • 4.46e3
83.73
  • 83.73
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.64e3
  • 4.64e3
  • 4.70e3
83.09
  • 83.09
  • 82.85
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.84e3
  • 4.84e3
  • 6.04e3
82.36
  • 82.36
  • 77.98
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.87e3
  • 4.87e3
82.25
  • 82.25
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
7.49e3
  • 7.49e3
72.68
  • 72.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
7.60e3
  • 7.60e3
  • 9.38e3
72.30
  • 72.30
  • 65.78
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.65e3
  • 7.65e3
72.11
  • 72.11
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
  • 1.07e4
61.47
  • 61.47
  • 61.07
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLD29960
EnsemblENSRNOG00000020922 (Hspb6)
RGD621554 (Hspb6)
Uniprot/SWISSPROTHSPB6_RAT, P97541

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