R. norvegicus Gene: Rtn3 - ENSRNOG00000021202 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000021202
NameRtn3
Descriptionreticulon 3 [Source:RGD Symbol;Acc:620988]
OrganismRattus norvegicus (rat)
Synonym(s)q6p6r3, q8vbu0

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
132
  • 132
  • 436
99.52063
  • 99.52063
  • 98.41339
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
156
  • 156
  • 212
99.43364
  • 99.43364
  • 99.22880
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
278
  • 278
98.98920
  • 98.98920
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
419
  • 419
  • 419
98.47616
  • 98.47616
  • 98.47500
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
898
  • 898
96.72955
  • 96.72955
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.11e3
  • 1.11e3
95.94956
  • 95.94956
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.22e3
  • 1.22e3
95.54069
  • 95.54069
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.26e3
  • 1.26e3
95.40001
  • 95.40001
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.32e3
  • 1.32e3
95.18222
  • 95.18222
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.35e3
  • 1.35e3
95.09348
  • 95.09348
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.53e3
  • 1.53e3
94.42124
  • 94.42124
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.61e3
  • 1.61e3
  • 2.12e3
94.11467
  • 94.11467
  • 92.27775
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.67e3
  • 1.67e3
93.91870
  • 93.91870
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.67e3
  • 1.67e3
93.90159
  • 93.90159
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.76e3
  • 1.76e3
93.58438
  • 93.58438
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.82e3
  • 1.82e3
93.35821
  • 93.35821
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.83e3
  • 1.83e3
93.32060
  • 93.32060
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.98e3
  • 1.98e3
92.76566
  • 92.76566
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.37e3
  • 2.37e3
91.35121
  • 91.35121
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.43e3
  • 2.43e3
91.15086
  • 91.15086
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.44e3
  • 2.44e3
  • 2.91e3
91.11500
  • 91.11500
  • 89.37655
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.46e3
  • 2.46e3
91.03414
  • 91.03414
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

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