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R. norvegicus Gene: Smox - ENSRNOG00000021255 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000021255
NameSmox
Descriptionspermine oxidase [Source:RGD Symbol;Acc:1306049]
OrganismRattus norvegicus (rat)
Synonym(s)loc308652, rgd1564480, rgd1564480 {eco:0000313|ensembl:ensrnop00000028876,gn eco:0000313|rgd:1564480}
Orthologs(s)17 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
598
  • 598
  • 4.17e3
97.83
  • 97.83
  • 84.81
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.55e3
  • 2.55e3
  • 9.42e3
90.73
  • 90.73
  • 65.68
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.90e3
  • 2.90e3
89.43
  • 89.43
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
3.29e3
  • 3.29e3
88.02
  • 88.02
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.86e3
  • 3.86e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.13e3
  • 4.13e3
  • 6.24e3
84.95
  • 84.95
  • 77.28
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.21e3
  • 5.21e3
81.01
  • 81.01
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
5.53e3
  • 5.53e3
79.85
  • 79.85
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.47e3
  • 6.47e3
76.43
  • 76.43
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.88e3
  • 6.88e3
74.95
  • 74.95
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.63e3
  • 7.63e3
72.20
  • 72.20
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.81e3
  • 7.81e3
71.55
  • 71.55
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
7.93e3
  • 7.93e3
71.11
  • 71.11
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
8.72e3
  • 8.72e3
  • 9.14e3
  • 9.74e3
68.24
  • 68.24
  • 66.72
  • 64.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.73e3
  • 8.73e3
68.21
  • 68.21
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.74e3
  • 8.74e3
68.17
  • 68.17
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.75e3
  • 8.75e3
68.13
  • 68.13
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.75e3
  • 9.75e3
64.49
  • 64.49
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.37
  • 62.37
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.11e4
  • 1.11e4
  • 1.12e4
59.47
  • 59.47
  • 59.05
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
56.87
  • 56.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000021255.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000021255.

Cross-references

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