R. norvegicus Gene: Rbbp5 - ENSRNOG00000021289 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000021289
NameRbbp5
Descriptionretinoblastoma binding protein 5 [Source:RGD Symbol;Acc:1305532]
OrganismRattus norvegicus (rat)
Synonym(s)loc304794, rbbp5_predicted
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.21e3
  • 4.21e3
  • 6.71e3
84.65
  • 84.65
  • 75.55
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
5.19e3
  • 5.19e3
81.09
  • 81.09
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.20e3
  • 5.20e3
81.08
  • 81.08
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.54e3
  • 5.54e3
79.83
  • 79.83
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.87e3
  • 5.87e3
78.62
  • 78.62
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.05e3
  • 6.05e3
  • 7.21e3
77.97
  • 77.97
  • 73.73
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.30e3
  • 6.30e3
77.07
  • 77.07
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.40e3
  • 6.40e3
76.69
  • 76.69
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
6.77e3
  • 6.77e3
  • 6.88e3
  • 7.20e3
75.34
  • 75.34
  • 74.93
  • 73.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.84e3
  • 6.84e3
75.10
  • 75.10
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.87e3
  • 6.87e3
74.98
  • 74.98
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.08e3
  • 7.08e3
74.22
  • 74.22
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.10e3
  • 7.10e3
74.14
  • 74.14
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.36e3
  • 7.36e3
73.19
  • 73.19
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.38e3
  • 7.38e3
  • 1.02e4
73.13
  • 73.13
  • 63.01
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
7.53e3
  • 7.53e3
72.59
  • 72.59
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.64e3
  • 7.64e3
72.19
  • 72.19
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.72e3
  • 7.72e3
71.86
  • 71.86
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
7.83e3
  • 7.83e3
71.50
  • 71.50
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.97e3
  • 7.97e3
70.95
  • 70.95
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.12
  • 59.12
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
  • 1.31e4
52.33
  • 52.33
  • 52.10
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Glires2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000021289.

Cross-references

EnsemblENSRNOG00000021289 (Rbbp5)
RGD1305532 (Rbbp5)
EMBLAC105703, CH473958
Uniprot/SPTREMBLD3ZC01, D3ZC01_RAT

Do not show this banner again