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R. norvegicus Gene: Slc22a20 - ENSRNOG00000022673 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000022673
NameSlc22a20
Descriptionsolute carrier family 22, member 20 [Source:RGD Symbol;Acc:1311460]
OrganismRattus norvegicus (rat)
Synonym(s)gm963, gm963_predicted, loc293686
Orthologs(s)10 orthologs
Paralog(s)28 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.50
  • 53.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
1.31e4
  • 1.31e4
52.13
  • 52.13
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
  • 2.26e4
37.12
  • 37.12
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
36.29
  • 36.29
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.84e4
  • 1.84e4
32.89
  • 32.89
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.98e4
  • 1.98e4
28.00
  • 28.00
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.21e4
  • 2.21e4
19.65
  • 19.65
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.21e4
  • 2.21e4
  • 2.30e4
19.54
  • 19.54
  • 16.04
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia1 species1 geneCompare expression
Glires2 species2 genesCompare expression
Euarchontoglires3 species3 genesCompare expression
Boreoeutheria8 species8 genesCompare expression
Theria9 species9 genesCompare expression
Tetrapoda10 species10 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000022673.

Paralogs (same species)

Cross-references

EnsemblENSRNOG00000022673 (Slc22a20)
RGD1311460 (Slc22a20)
EMBLAC131475, CH473953
Uniprot/SPTREMBLD3ZXZ4, D3ZXZ4_RAT

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