R. norvegicus Gene: Ankfn1 - ENSRNOG00000023532 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000023532
NameAnkfn1
Descriptionankyrin-repeat and fibronectin type III domain containing 1 [Source:MGI Symbol;Acc:MGI:2686021]
OrganismRattus norvegicus (rat)
Synonym(s)4932411e22rik, loc382543, nmf9
Orthologs(s)10 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
  • 1.43e4
57.86
  • 57.86
  • 48.09
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.72
  • 53.72
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
  • 1.66e4
49.37
  • 49.37
  • 39.36
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.07
  • 39.07
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
27.69
  • 27.69
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
27.54
  • 27.54
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.10e4
  • 2.10e4
23.56
  • 23.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires1 species1 geneCompare expression
Euarchontoglires2 species2 genesCompare expression
Boreoeutheria6 species6 genesCompare expression
Mammalia7 species7 genesCompare expression
Amniota9 species9 genesCompare expression
Tetrapoda10 species10 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000023532.

Cross-references

EnsemblENSRNOG00000023532 (Ankfn1)
MGIMGI:2686021 (Ankfn1)
EMBLAABR07030233
Uniprot/SPTREMBLD4A9Q9, D4A9Q9_RAT

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