We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

R. norvegicus Gene: Fan1 - ENSRNOG00000023985 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000023985
NameFan1
DescriptionFANCD2/FANCI-associated nuclease 1 [Source:RGD Symbol;Acc:1566323]
OrganismRattus norvegicus (rat)
Synonym(s)loc309256, mtmr15, rgd1566323
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.95e3
  • 8.95e3
67.38
  • 67.38
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
9.17e3
  • 9.17e3
66.61
  • 66.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.66e3
  • 9.66e3
  • 1.32e4
64.82
  • 64.82
  • 52.01
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.00e4
  • 1.00e4
  • 1.06e4
  • 1.27e4
63.53
  • 63.53
  • 61.43
  • 53.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.51
  • 62.51
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
  • 1.27e4
61.58
  • 61.58
  • 53.63
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.49
  • 61.49
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.24
  • 61.24
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
59.87
  • 59.87
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.70
  • 58.70
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.53
  • 58.53
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
57.08
  • 57.08
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.34e4
57.03
  • 57.03
  • 51.31
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.50
  • 55.50
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
55.22
  • 55.22
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
53.07
  • 53.07
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.71
  • 52.71
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.59
  • 52.59
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.55
  • 52.55
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.99
  • 51.99
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
50.12
  • 50.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000023985.

Cross-references

EnsemblENSRNOG00000023985 (Fan1)
RGD1566323 (Fan1)
EMBLAABR07004102
Uniprot/SPTREMBLD3ZVU2, D3ZVU2_RAT

Do not show this banner again