R. norvegicus Gene: Actr5 - ENSRNOG00000023989 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000023989
NameActr5
DescriptionARP5 actin-related protein 5 homolog (yeast) [Source:RGD Symbol;Acc:1307958]
OrganismRattus norvegicus (rat)
Synonym(s)loc362258
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
7.11e3
  • 7.11e3
74.11
  • 74.11
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.20e3
  • 7.20e3
73.79
  • 73.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.81e3
  • 7.81e3
  • 8.70e3
71.55
  • 71.55
  • 68.30
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
7.87e3
  • 7.87e3
  • 8.89e3
  • 9.61e3
71.34
  • 71.34
  • 67.62
  • 64.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.42e3
  • 8.42e3
69.33
  • 69.33
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.78e3
  • 8.78e3
68.02
  • 68.02
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.01e3
  • 9.01e3
67.18
  • 67.18
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.13e3
  • 9.13e3
66.74
  • 66.74
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
9.37e3
  • 9.37e3
65.87
  • 65.87
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
9.50e3
  • 9.50e3
65.41
  • 65.41
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.51e3
  • 9.51e3
  • 1.08e4
65.36
  • 65.36
  • 60.51
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
9.65e3
  • 9.65e3
64.85
  • 64.85
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.89e3
  • 9.89e3
63.97
  • 63.97
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
9.94e3
  • 9.94e3
63.80
  • 63.80
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
63.51
  • 63.51
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
  • 1.10e4
62.85
  • 62.85
  • 60.11
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
61.96
  • 61.96
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.83
  • 61.83
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.75
  • 61.75
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.24
  • 61.24
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.56
  • 59.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000023989.

Cross-references

EnsemblENSRNOG00000023989 (Actr5)
RGD1307958 (Actr5)
EMBLAABR07054467
Uniprot/SPTREMBLD3ZAQ1, D3ZAQ1_RAT

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