R. norvegicus Gene: Nrn1l - ENSRNOG00000024025 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000024025
NameNrn1l
Descriptionneuritin 1-like [Source:RGD Symbol;Acc:2301010]
OrganismRattus norvegicus (rat)
Synonym(s)edc4 {eco:0000313|ensembl:ensrnop00000006345,gn eco:0000313|rgd:1562009}, loc361399, lrrg00115, mgc124746, q6qi93, rgd1309136
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.97e3
  • 2.97e3
89.19
  • 89.19
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.27e3
  • 3.27e3
  • 1.00e4
88.09
  • 88.09
  • 63.58
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
4.16e3
  • 4.16e3
84.85
  • 84.85
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.17e3
  • 4.17e3
  • 4.93e3
84.81
  • 84.81
  • 82.05
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.22e3
  • 4.22e3
84.62
  • 84.62
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.46e3
  • 4.46e3
83.75
  • 83.75
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.09e3
  • 5.09e3
81.47
  • 81.47
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.47e3
  • 5.47e3
80.08
  • 80.08
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.48e3
  • 5.48e3
80.04
  • 80.04
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.57e3
  • 5.57e3
79.72
  • 79.72
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
5.85e3
  • 5.85e3
  • 5.97e3
78.70
  • 78.70
  • 78.24
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.00e3
  • 6.00e3
78.15
  • 78.15
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.30e3
  • 6.30e3
77.05
  • 77.05
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.36e3
  • 6.36e3
76.85
  • 76.85
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.45e3
  • 6.45e3
76.49
  • 76.49
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
6.52e3
  • 6.52e3
  • 6.89e3
  • 7.26e3
76.26
  • 76.26
  • 74.91
  • 73.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.55e3
  • 6.55e3
76.15
  • 76.15
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.79e3
  • 6.79e3
75.26
  • 75.26
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.90e3
  • 6.90e3
74.88
  • 74.88
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.59e3
  • 7.59e3
72.36
  • 72.36
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
8.36e3
  • 8.36e3
69.56
  • 69.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000024025.

Cross-references

EnsemblENSRNOG00000024025 (Nrn1l)
RGD1562009 (Edc4), 2301010 (Nrn1l)
EMBLAC106288, AY539866, BC103628
Uniprot/SPTREMBLF7F707, F7F707_RAT
Uniprot/SWISSPROTEDC4_RAT, Q3ZAV8

Do not show this banner again