R. norvegicus Gene: Chd8 - ENSRNOG00000025011 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000025011
NameChd8
Descriptionchromodomain helicase DNA binding protein 8 [Source:RGD Symbol;Acc:620696]
OrganismRattus norvegicus (rat)
Synonym(s)chd-8, loc65027

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.37e3
  • 2.37e3
  • 6.08e3
91.35208
  • 91.35208
  • 77.82274
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.39e3
  • 4.39e3
83.99664
  • 83.99664
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.95e3
  • 4.95e3
81.93931
  • 81.93931
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.31e3
  • 5.31e3
80.65328
  • 80.65328
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.53e3
  • 5.53e3
  • 8.80e3
79.81909
  • 79.81909
  • 67.91892
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
5.56e3
  • 5.56e3
79.72459
  • 79.72459
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.05e3
  • 6.05e3
77.93314
  • 77.93314
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.13e3
  • 6.13e3
  • 6.64e3
77.64602
  • 77.64602
  • 75.79473
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.21e3
  • 6.21e3
77.36441
  • 77.36441
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.22e3
  • 6.22e3
77.30018
  • 77.30018
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
6.50e3
  • 6.50e3
76.31119
  • 76.31119
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.76e3
  • 6.76e3
75.36051
  • 75.36051
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.16e3
  • 7.16e3
73.89970
  • 73.89970
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
7.30e3
  • 7.30e3
  • 7.38e3
73.37192
  • 73.37192
  • 73.07999
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.31e3
  • 7.31e3
73.34975
  • 73.34975
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
7.49e3
  • 7.49e3
  • 7.98e3
72.70289
  • 72.70289
  • 70.89645
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.54e3
  • 7.54e3
72.50826
  • 72.50826
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.58e3
  • 7.58e3
72.35879
  • 72.35879
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.64e3
  • 7.64e3
72.13765
  • 72.13765
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.65e3
  • 7.65e3
72.09589
  • 72.09589
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
7.95e3
  • 7.95e3
70.99354
  • 70.99354
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAF169825, CH474040
EnsemblENSRNOG00000025011 (Chd8)
RGD620696 (Chd8)
Uniprot/SWISSPROTCHD8_RAT, Q9JIX5

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