R. norvegicus Gene: Chd8 - ENSRNOG00000025011 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000025011
NameChd8
Descriptionchromodomain helicase DNA binding protein 8 [Source:RGD Symbol;Acc:620696]
OrganismRattus norvegicus (rat)
Synonym(s)chd-8, loc65027

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.39e3
  • 4.39e3
83.60850
  • 83.60850
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.95e3
  • 4.95e3
81.50250
  • 81.50250
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.35e3
  • 5.35e3
79.99940
  • 79.99940
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
5.56e3
  • 5.56e3
79.23580
  • 79.23580
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.05e3
  • 6.05e3
77.39624
  • 77.39624
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.95e3
  • 6.95e3
74.04274
  • 74.04274
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
7.14e3
  • 7.14e3
73.32861
  • 73.32861
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
7.16e3
  • 7.16e3
  • 7.24e3
73.24365
  • 73.24365
  • 72.95031
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.41e3
  • 7.41e3
72.30223
  • 72.30223
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
8.64e3
  • 8.64e3
67.73300
  • 67.73300
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAF169825, CH474040
EnsemblENSRNOG00000025011 (Chd8)
RGD620696 (Chd8)
Uniprot/SWISSPROTCHD8_RAT, Q9JIX5

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