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R. norvegicus Gene: Icam2 - ENSRNOG00000025143 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000025143
NameIcam2
Descriptionintercellular adhesion molecule 2 [Source:RGD Symbol;Acc:1359660]
OrganismRattus norvegicus (rat)
Synonym(s)mgc95023
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
859
  • 859
96.87
  • 96.87
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
875
  • 875
96.82
  • 96.82
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.90e3
  • 1.90e3
93.10
  • 93.10
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.78e3
  • 2.78e3
89.88
  • 89.88
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.53e3
  • 4.53e3
  • 1.18e4
83.50
  • 83.50
  • 57.13
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
4.97e3
  • 4.97e3
81.91
  • 81.91
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
5.41e3
  • 5.41e3
80.30
  • 80.30
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.61e3
  • 5.61e3
79.57
  • 79.57
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
5.63e3
  • 5.63e3
  • 7.63e3
  • 8.37e3
79.49
  • 79.49
  • 72.22
  • 69.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.87e3
  • 5.87e3
78.60
  • 78.60
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.24e3
  • 6.24e3
77.27
  • 77.27
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.52e3
  • 6.52e3
76.26
  • 76.26
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.55e3
  • 6.55e3
76.13
  • 76.13
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.60e3
  • 6.60e3
75.95
  • 75.95
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.83e3
  • 6.83e3
75.12
  • 75.12
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.33e3
  • 9.33e3
66.03
  • 66.03
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.42e3
  • 9.42e3
65.70
  • 65.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.81e3
  • 9.81e3
  • 1.60e4
64.26
  • 64.26
  • 41.78
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
63.55
  • 63.55
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
  • 1.25e4
62.37
  • 62.37
  • 54.43
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
59.86
  • 59.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000025143.

Cross-references

EnsemblENSRNOG00000025143 (Icam2)
RGD1359660 (Icam2)
EMBLAABR07072198, BC079465, CH473948
Uniprot/SPTREMBLQ6AXM6, Q6AXM6_RAT

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