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R. norvegicus Gene: Myh6 - ENSRNOG00000025757 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000025757
NameMyh6
Descriptionmyosin, heavy chain 6, cardiac muscle, alpha [Source:RGD Symbol;Acc:62029]
OrganismRattus norvegicus (rat)
Synonym(s)myhca
Orthologs(s)27 orthologs
Paralog(s)9 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
23.6
  • 23.6
99.92
  • 99.92
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
3.35e3
  • 3.35e3
87.80
  • 87.80
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
5.46e3
  • 5.46e3
80.11
  • 80.11
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
9.40e3
  • 9.40e3
65.77
  • 65.77
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
9.46e3
  • 9.46e3
65.54
  • 65.54
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
9.61e3
  • 9.61e3
64.98
  • 64.98
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
  • 1.20e4
58.06
  • 58.06
  • 56.18
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.37
  • 57.37
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
  • 2.03e4
56.52
  • 56.52
  • 26.14
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.90
  • 54.90
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
  • 1.63e4
52.94
  • 52.94
  • 40.47
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.73
  • 52.73
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.56
  • 52.56
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.48
  • 52.48
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.74
  • 50.74
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
48.65
  • 48.65
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
47.68
  • 47.68
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
40.43
  • 40.43
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.79e4
  • 1.79e4
34.72
  • 34.72
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.86e4
  • 1.86e4
32.07
  • 32.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Euarchontoglires5 species5 genesCompare expression
Boreoeutheria7 species7 genesCompare expression
Mammalia8 species8 genesCompare expression
Tetrapoda9 species10 genesCompare expression
Euteleostomi10 species17 genesCompare expression
Bilateria16 species27 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000025757.

Paralogs (same species)

Cross-references

EnsemblENSRNOG00000025757 (Myh6)
RGD62029 (Myh6)
EMBLAC115371
Uniprot/SPTREMBLG3V885, G3V885_RAT

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