R. norvegicus Gene: Dnmt3a - ENSRNOG00000026649 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000026649
NameDnmt3a
DescriptionDNA (cytosine-5-)-methyltransferase 3 alpha [Source:RGD Symbol;Acc:1303336]
OrganismRattus norvegicus (rat)
Synonym(s)mgc109195, q1lz52

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.06e3
  • 4.06e3
85.18777
  • 85.18777
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.65e3
  • 4.65e3
83.04428
  • 83.04428
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.84e3
  • 4.84e3
82.34617
  • 82.34617
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.26e3
  • 6.26e3
77.15578
  • 77.15578
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.38e3
  • 7.38e3
  • 1.01e4
73.07448
  • 73.07448
  • 63.15691
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.72e3
  • 7.72e3
71.83857
  • 71.83857
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.93e3
  • 7.93e3
  • 8.40e3
71.06904
  • 71.06904
  • 69.35759
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.44e3
  • 8.44e3
69.23270
  • 69.23270
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.58e3
  • 8.58e3
68.70854
  • 68.70854
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
8.85e3
  • 8.85e3
  • 9.37e3
67.74009
  • 67.74009
  • 65.83003
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
9.17e3
  • 9.17e3
66.55520
  • 66.55520
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
9.33e3
  • 9.33e3
65.97863
  • 65.97863
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.79e3
  • 9.79e3
64.29321
  • 64.29321
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
9.83e3
  • 9.83e3
64.14965
  • 64.14965
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.90e3
  • 9.90e3
63.89145
  • 63.89145
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
62.00485
  • 62.00485
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.71299
  • 61.71299
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
61.10654
  • 61.10654
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.21447
  • 60.21447
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
  • 1.33e4
57.66131
  • 57.66131
  • 51.41303
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBN000395, BN000396
EnsemblENSRNOG00000026649 (Dnmt3a)
RGD1303336 (Dnmt3a)
Uniprot/SWISSPROTDNM3A_RAT, Q1LZ53

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