R. norvegicus Gene: Ggact - ENSRNOG00000027040 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000027040
NameGgact
Descriptiongamma-glutamylamine cyclotransferase [Source:RGD Symbol;Acc:1304748]
OrganismRattus norvegicus (rat)
Synonym(s)a2ld1, loc290500, mgc112665, rgd1304748
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.72e3
  • 1.72e3
93.75
  • 93.75
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.98e3
  • 1.98e3
92.79
  • 92.79
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.34e3
  • 2.34e3
91.47
  • 91.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
2.55e3
  • 2.55e3
  • 2.95e3
  • 3.15e3
90.70
  • 90.70
  • 89.25
  • 88.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.16e3
  • 3.16e3
88.49
  • 88.49
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
4.00e3
  • 4.00e3
85.43
  • 85.43
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.14e3
  • 4.14e3
  • 6.84e3
84.91
  • 84.91
  • 75.09
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.64e3
  • 4.64e3
83.10
  • 83.10
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.25e3
  • 6.25e3
  • 6.80e3
77.24
  • 77.24
  • 75.25
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.52e3
  • 6.52e3
76.26
  • 76.26
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.76e3
  • 6.76e3
75.40
  • 75.40
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.28e3
  • 7.28e3
73.49
  • 73.49
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
7.38e3
  • 7.38e3
73.12
  • 73.12
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.49e3
  • 7.49e3
72.73
  • 72.73
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.53e3
  • 7.53e3
72.56
  • 72.56
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.58e3
  • 7.58e3
72.40
  • 72.40
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.65e3
  • 7.65e3
72.15
  • 72.15
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.88e3
  • 7.88e3
71.28
  • 71.28
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.42e3
  • 8.42e3
69.31
  • 69.31
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
62.28
  • 62.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species19 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000027040.

Cross-references

EnsemblENSRNOG00000027040 (Ggact)
RGD1304748 (Ggact)
EMBLBC098699
Uniprot/SWISSPROTGGACT_RAT, Q4KM86

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