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R. norvegicus Gene: Lrrc8e - ENSRNOG00000028460 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000028460
NameLrrc8e
Descriptionleucine rich repeat containing 8 family, member E [Source:RGD Symbol;Acc:1311979]
OrganismRattus norvegicus (rat)
Synonym(s)loc304203, mgc124693, rgd1311979
Orthologs(s)16 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.67e3
  • 6.67e3
75.72
  • 75.72
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.60e3
  • 7.60e3
72.32
  • 72.32
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.74e3
  • 8.74e3
68.17
  • 68.17
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.48
  • 61.48
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.81
  • 57.81
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.71
  • 56.71
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.72
  • 55.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
  • 1.78e4
54.36
  • 54.36
  • 35.24
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
48.56
  • 48.56
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
  • 1.50e4
47.47
  • 47.47
  • 45.50
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
47.45
  • 47.45
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
44.78
  • 44.78
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
43.60
  • 43.60
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
43.38
  • 43.38
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.79e4
  • 1.79e4
34.83
  • 34.83
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
33.87
  • 33.87
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.85e4
  • 1.85e4
32.48
  • 32.48
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.87e4
  • 1.87e4
31.72
  • 31.72
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.93e4
  • 1.93e4
29.85
  • 29.85
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000028460.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa3 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000028460.

Cross-references

EnsemblENSRNOG00000028460 (Lrrc8e)
RGD1311979 (Lrrc8e)
EMBLBC105779
Uniprot/SWISSPROTLRC8E_RAT, Q3KRC6

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