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R. norvegicus Gene: Gdpd4 - ENSRNOG00000028470 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000028470
NameGdpd4
Descriptionglycerophosphodiester phosphodiesterase domain containing 4 [Source:RGD Symbol;Acc:1585799]
OrganismRattus norvegicus (rat)
Synonym(s)loc680990
Orthologs(s)21 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.43e3
  • 8.43e3
  • 2.26e4
69.30
  • 69.30
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
44.04
  • 44.04
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
  • 1.99e4
37.41
  • 37.41
  • 27.57
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
35.19
  • 35.19
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
  • 2.23e4
27.57
  • 27.57
  • 18.87
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.31e4
  • 2.31e4
15.96
  • 15.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species4 genesCompare expression
Euarchontoglires7 species8 genesCompare expression
Boreoeutheria13 species16 genesCompare expression
Theria14 species17 genesCompare expression
Mammalia15 species18 genesCompare expression
Amniota17 species20 genesCompare expression
Tetrapoda18 species21 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000028470.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000028470.

Cross-references

EnsemblENSRNOG00000028470 (Gdpd4)
RGD1585799 (Gdpd4)
EMBLAC123463
Uniprot/SPTREMBLF1M812, F1M812_RAT

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