R. norvegicus Gene: Stx1a - ENSRNOG00000029165 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000029165
NameStx1a
Descriptionsyntaxin 1A (brain) [Source:RGD Symbol;Acc:69430]
OrganismRattus norvegicus (rat)
Synonym(s)p35a, sap

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
514
  • 514
  • 831
98.13003
  • 98.13003
  • 96.97089
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
4.30e3
  • 4.30e3
84.30930
  • 84.30930
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
5.56e3
  • 5.56e3
  • 5.73e3
79.70639
  • 79.70639
  • 79.09410
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
9.45e3
  • 9.45e3
65.53467
  • 65.53467
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.87e3
  • 9.87e3
64.01105
  • 64.01105
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.39341
  • 58.39341
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
  • 1.41e4
56.96466
  • 56.96466
  • 48.52168
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.07809
  • 56.07809
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.07105
  • 56.07105
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.41857
  • 55.41857
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.35011
  • 54.35011
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.21330
  • 54.21330
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.04906
  • 54.04906
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.55258
  • 53.55258
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.65109
  • 52.65109
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.47992
  • 52.47992
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.64391
  • 50.64391
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
50.15064
  • 50.15064
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.57690
  • 49.57690
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
49.25426
  • 49.25426
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
  • 1.52e4
49.09582
  • 49.09582
  • 44.59996
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLD10392, D12519, M95734
EnsemblENSRNOG00000029165 (Stx1a)
RGD69430 (Stx1a)
Uniprot/SWISSPROTP32851, STX1A_RAT

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