R. norvegicus Gene: Stx1a - ENSRNOG00000029165 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000029165
NameStx1a
Descriptionsyntaxin 1A (brain) [Source:RGD Symbol;Acc:69430]
OrganismRattus norvegicus (rat)
Synonym(s)p35a, sap

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
856
  • 856
96.80705
  • 96.80705
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
5.57e3
  • 5.57e3
  • 5.76e3
79.20614
  • 79.20614
  • 78.49869
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
57.37726
  • 57.37726
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
54.95318
  • 54.95318
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
53.09808
  • 53.09808
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
50.94343
  • 50.94343
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
49.45894
  • 49.45894
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
48.34786
  • 48.34786
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
46.36067
  • 46.36067
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
44.53602
  • 44.53602
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLD10392, D12519, M95734
EnsemblENSRNOG00000029165 (Stx1a)
RGD69430 (Stx1a)
Uniprot/SWISSPROTP32851, STX1A_RAT

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