Gene: Pabpn1l - ENSRNOG00000029558 - Rattus norvegicus (rat)

General information

Ensembl ID	ENSRNOG00000029558
Name	Pabpn1l
Description	poly(A)binding protein nuclear 1-like [Source:RGD Symbol;Acc:1562761]
Organism	Rattus norvegicus (rat)
Synonym(s)	epabp2, loc307920, pabpnl1, rgd1562761

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	1.21e4 1.21e4 2.16e4	55.70631 55.70631 21.16833	AEIR AEIR AEIR
UBERON:0002370	thymus	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.34e4 1.34e4	51.16610 51.16610	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.44e4 1.44e4	47.53255 47.53255	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.54e4 1.54e4	43.79217 43.79217	AEIR AEIR
UBERON:0002037	cerebellum	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.57e4 1.57e4	42.58726 42.58726	AEIR AEIR
UBERON:0001264	pancreas	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.63e4 1.63e4	40.50746 40.50746	AEIR AEIR
UBERON:0001155	colon	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.67e4 1.67e4	39.05424 39.05424	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.69e4 1.69e4	38.49889 38.49889	AEIR AEIR
UBERON:0002115	jejunum	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.69e4 1.69e4	38.40369 38.40369	AEIR AEIR
UBERON:0002116	ileum	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.70e4 1.70e4	37.89069 37.89069	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.71e4 1.71e4	37.59729 37.59729	AEIR AEIR
UBERON:0001043	esophagus	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.73e4 1.73e4	36.79075 36.79075	AEIR AEIR
UBERON:0001870	frontal cortex	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	1.75e4 1.75e4 2.14e4	36.18496 36.18496 21.90790	AEIR AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.76e4 1.76e4	35.80395 35.80395	AEIR AEIR
UBERON:0001377	quadriceps femoris	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.83e4 1.83e4	33.34814 33.34814	AEIR AEIR
UBERON:0002114	duodenum	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.86e4 1.86e4	32.01638 32.01638	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.00e4 2.00e4	27.03100 27.03100	AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.12e4 2.12e4	22.58212 22.58212	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

EMBL	BC158789
Ensembl	ENSRNOG00000029558 (Pabpn1l)
RGD	1562761 (Pabpn1l)
Uniprot/SWISSPROT	B0BNE4, EPAB2_RAT