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R. norvegicus Gene: Slc8a3 - ENSRNOG00000029871 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000029871
NameSlc8a3
Descriptionsolute carrier family 8 (sodium/calcium exchanger), member 3 [Source:RGD Symbol;Acc:620197]
OrganismRattus norvegicus (rat)
Synonym(s)ncx3
Orthologs(s)24 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.31e3
  • 4.31e3
84.30
  • 84.30
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.62e3
  • 4.62e3
83.16
  • 83.16
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
7.59e3
  • 7.59e3
72.34
  • 72.34
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.68e3
  • 8.68e3
68.37
  • 68.37
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.53e3
  • 9.53e3
  • 1.04e4
65.29
  • 65.29
  • 62.18
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
  • 1.79e4
48.53
  • 48.53
  • 34.87
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
  • 1.82e4
45.95
  • 45.95
  • 33.71
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
44.58
  • 44.58
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
42.60
  • 42.60
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
42.44
  • 42.44
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
41.55
  • 41.55
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
41.15
  • 41.15
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
39.66
  • 39.66
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.68e4
  • 1.68e4
38.82
  • 38.82
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
35.89
  • 35.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species24 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000029871.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000029871.

Cross-references

EnsemblENSRNOG00000029871 (Slc8a3)
RGD620197 (Slc8a3)
EMBLU53420
Uniprot/SWISSPROTNAC3_RAT, P70549

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