R. norvegicus Gene: Ptpn11 - ENSRNOG00000030124 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000030124
NamePtpn11
Descriptionprotein tyrosine phosphatase, non-receptor type 11 [Source:RGD Symbol;Acc:3447]
OrganismRattus norvegicus (rat)
Synonym(s)ptp-1d, q62626, shp-2, shp2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
937
  • 937
  • 1.32e3
96.58489
  • 96.58489
  • 95.17956
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.06e3
  • 1.06e3
96.12985
  • 96.12985
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.45e3
  • 1.45e3
94.72492
  • 94.72492
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.46e3
  • 1.46e3
94.67221
  • 94.67221
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.62e3
  • 1.62e3
  • 2.78e3
94.07878
  • 94.07878
  • 89.84918
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.88e3
  • 1.88e3
93.13791
  • 93.13791
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.99e3
  • 1.99e3
92.75862
  • 92.75862
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.66e3
  • 2.66e3
90.30656
  • 90.30656
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.56e3
  • 3.56e3
87.01919
  • 87.01919
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.65e3
  • 3.65e3
86.69854
  • 86.69854
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.81e3
  • 3.81e3
86.09458
  • 86.09458
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.14e3
  • 4.14e3
84.91082
  • 84.91082
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
4.21e3
  • 4.21e3
  • 4.40e3
84.65580
  • 84.65580
  • 83.96663
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.24e3
  • 4.24e3
84.54802
  • 84.54802
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
4.51e3
  • 4.51e3
83.56925
  • 83.56925
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.60e3
  • 4.60e3
83.23825
  • 83.23825
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.75e3
  • 4.75e3
82.66276
  • 82.66276
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
5.00e3
  • 5.00e3
81.76536
  • 81.76536
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
5.28e3
  • 5.28e3
80.75088
  • 80.75088
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.06e3
  • 9.06e3
  • 1.02e4
66.97611
  • 66.97611
  • 62.97917
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLU05963, U09307
EnsemblENSRNOG00000030124 (Ptpn11)
RGD3447 (Ptpn11)
Uniprot/SWISSPROTP41499, PTN11_RAT

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