R. norvegicus Gene: Ptpn11 - ENSRNOG00000030124 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000030124
NamePtpn11
Descriptionprotein tyrosine phosphatase, non-receptor type 11 [Source:RGD Symbol;Acc:3447]
OrganismRattus norvegicus (rat)
Synonym(s)ptp-1d, q62626, shp-2, shp2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
919
  • 919
  • 1.30e3
96.56849
  • 96.56849
  • 95.15640
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.06e3
  • 1.06e3
96.03572
  • 96.03572
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.35e3
  • 1.35e3
94.96133
  • 94.96133
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.66e3
  • 2.66e3
90.07136
  • 90.07136
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.81e3
  • 3.81e3
85.75643
  • 85.75643
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.05e3
  • 4.05e3
84.88877
  • 84.88877
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
4.19e3
  • 4.19e3
84.33104
  • 84.33104
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.25e3
  • 4.25e3
84.12371
  • 84.12371
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
8.78e3
  • 8.78e3
67.20427
  • 67.20427
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLU05963, U09307
EnsemblENSRNOG00000030124 (Ptpn11)
RGD3447 (Ptpn11)
Uniprot/SWISSPROTP41499, PTN11_RAT

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