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R. norvegicus Gene: AABR07031937.1 - ENSRNOG00000030301 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000030301
NameAABR07031937.1
Description-
OrganismRattus norvegicus (rat)
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.00e4
  • 2.00e4
27.14
  • 27.14
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
2.12e4
  • 2.12e4
22.73
  • 22.73
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.12e4
  • 2.12e4
22.69
  • 22.69
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.21e4
  • 2.21e4
  • 2.28e4
19.54
  • 19.54
  • 17.08
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.24e4
  • 2.24e4
18.30
  • 18.30
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.30e4
  • 2.30e4
16.08
  • 16.08
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.35e4
  • 2.35e4
14.37
  • 14.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia1 species1 geneCompare expression
Glires2 species2 genesCompare expression
Euarchontoglires6 species8 genesCompare expression
Boreoeutheria11 species13 genesCompare expression
Mammalia12 species14 genesCompare expression
Amniota14 species16 genesCompare expression
Tetrapoda15 species17 genesCompare expression
Euteleostomi16 species18 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000030301.

Cross-references

EnsemblENSRNOG00000030301 (AABR07031937.1)
EMBLAABR07031937
Uniprot/SPTREMBLF1LY74, F1LY74_RAT

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