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R. norvegicus Gene: Htr2c - ENSRNOG00000030877 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000030877
NameHtr2c
Description5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled [Source:RGD Symbol;Acc:2848]
OrganismRattus norvegicus (rat)
Synonym(s)5-ht-1c, 5-ht1c, 5-ht2c, 5-htr2c, 5ht-1c
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.32e3
  • 4.32e3
  • 5.30e3
84.25
  • 84.25
  • 80.71
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
6.17e3
  • 6.17e3
  • 6.91e3
77.54
  • 77.54
  • 74.83
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.29e3
  • 7.29e3
  • 7.74e3
73.43
  • 73.43
  • 71.82
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
9.10e3
  • 9.10e3
66.84
  • 66.84
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.17
  • 39.17
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.12e4
  • 2.12e4
22.92
  • 22.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000030877.

Cross-references

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