R. norvegicus Gene: Rtn4r - ENSRNOG00000030920 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000030920
NameRtn4r
Descriptionreticulon 4 receptor [Source:RGD Symbol;Acc:620810]
OrganismRattus norvegicus (rat)
Synonym(s)ngr, ngr1, nogor

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.91e3
  • 1.91e3
  • 2.65e3
93.03549
  • 93.03549
  • 90.34128
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.91e3
  • 2.91e3
89.38658
  • 89.38658
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.37e3
  • 6.37e3
76.78404
  • 76.78404
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.96e3
  • 6.96e3
74.61261
  • 74.61261
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
9.48e3
  • 9.48e3
  • 9.50e3
65.44469
  • 65.44469
  • 65.34406
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.57647
  • 61.57647
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.09126
  • 60.09126
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.75705
  • 54.75705
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.68870
  • 54.68870
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.87614
  • 51.87614
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.81147
  • 51.81147
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
51.24087
  • 51.24087
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
51.06390
  • 51.06390
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.82248
  • 50.82248
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.60167
  • 49.60167
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
49.11763
  • 49.11763
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
  • 1.94e4
49.02633
  • 49.02633
  • 29.07820
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
47.25101
  • 47.25101
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
39.63337
  • 39.63337
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
  • 2.26e4
38.80417
  • 38.80417
  • 17.62593
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.72e4
  • 1.72e4
37.43174
  • 37.43174
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07034748, AF462390, AY028438, CH473999
EnsemblENSRNOG00000030920 (Rtn4r)
RGD620810 (Rtn4r)
Uniprot/SPTREMBLR9PXY1, R9PXY1_RAT
Uniprot/SWISSPROTQ99M75, RTN4R_RAT

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