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R. norvegicus Gene: Nckipsd - ENSRNOG00000031816 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000031816
NameNckipsd
DescriptionNCK interacting protein with SH3 domain [Source:RGD Symbol;Acc:1311323]
OrganismRattus norvegicus (rat)
Synonym(s)loc301009
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.70e3
  • 3.70e3
  • 3.94e3
86.53
  • 86.53
  • 85.63
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.54e3
  • 4.54e3
  • 6.15e3
83.47
  • 83.47
  • 77.59
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.56e3
  • 4.56e3
  • 4.97e3
83.39
  • 83.39
  • 81.90
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
4.81e3
  • 4.81e3
82.48
  • 82.48
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
8.59e3
  • 8.59e3
68.72
  • 68.72
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.93e3
  • 8.93e3
67.46
  • 67.46
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
9.31e3
  • 9.31e3
66.08
  • 66.08
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
9.70e3
  • 9.70e3
64.65
  • 64.65
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.97e3
  • 9.97e3
63.70
  • 63.70
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.04e4
  • 1.04e4
  • 1.12e4
  • 1.13e4
62.02
  • 62.02
  • 59.20
  • 58.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.55
  • 60.55
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.27
  • 60.27
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.13
  • 60.13
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
60.10
  • 60.10
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
59.79
  • 59.79
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.11
  • 59.11
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.55
  • 58.55
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.36
  • 58.36
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.28
  • 58.28
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
57.95
  • 57.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000031816.

Cross-references

EnsemblENSRNOG00000031816 (Nckipsd)
RGD1311323 (Nckipsd)
EMBLAC096455
Uniprot/SPTREMBLD3ZWX4, D3ZWX4_RAT

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