R. norvegicus Gene: Tymp - ENSRNOG00000032394 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000032394
NameTymp
Descriptionthymidine phosphorylase [Source:RGD Symbol;Acc:1305756]
OrganismRattus norvegicus (rat)
Synonym(s)ecgf1, loc315219, mgc108801, mgc112734, tp
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
494
  • 494
  • 669
  • 711
98.21
  • 98.21
  • 97.57
  • 97.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.84e3
  • 2.84e3
89.65
  • 89.65
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.95e3
  • 4.95e3
81.99
  • 81.99
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.29e3
  • 5.29e3
80.73
  • 80.73
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.46e3
  • 5.46e3
80.10
  • 80.10
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
5.58e3
  • 5.58e3
79.67
  • 79.67
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.91e3
  • 5.91e3
78.46
  • 78.46
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.04e3
  • 6.04e3
78.02
  • 78.02
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.34e3
  • 6.34e3
76.92
  • 76.92
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.53e3
  • 6.53e3
76.23
  • 76.23
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.53e3
  • 6.53e3
76.22
  • 76.22
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.59e3
  • 6.59e3
76.01
  • 76.01
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.69e3
  • 6.69e3
  • 6.71e3
75.63
  • 75.63
  • 75.58
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.73e3
  • 6.73e3
75.49
  • 75.49
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
6.82e3
  • 6.82e3
75.16
  • 75.16
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.97e3
  • 6.97e3
74.61
  • 74.61
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.99e3
  • 6.99e3
74.52
  • 74.52
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.08e3
  • 7.08e3
  • 9.99e3
74.21
  • 74.21
  • 63.62
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.19e3
  • 7.19e3
73.80
  • 73.80
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.35e3
  • 7.35e3
73.22
  • 73.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria8 species8 genesCompare expression
Theria9 species9 genesCompare expression
Amniota10 species10 genesCompare expression
Tetrapoda11 species11 genesCompare expression
Euteleostomi12 species12 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000032394.

Cross-references

EnsemblENSRNOG00000032394 (Tymp)
RGD1305756 (Tymp)
EMBLBC089830
Uniprot/SWISSPROTQ5FVR2, TYPH_RAT

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