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R. norvegicus Gene: S100a7a - ENSRNOG00000033352 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000033352
NameS100a7a
DescriptionS100 calcium binding protein A7A [Source:RGD Symbol;Acc:1593779]
OrganismRattus norvegicus (rat)
Synonym(s)loc685479, s100a15
Orthologs(s)10 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.83e3
  • 7.83e3
71.50
  • 71.50
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
40.92
  • 40.92
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.72e4
  • 1.72e4
37.40
  • 37.40
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.83e4
  • 1.83e4
33.32
  • 33.32
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.05e4
  • 2.05e4
25.16
  • 25.16
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.06e4
  • 2.06e4
24.95
  • 24.95
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.09e4
  • 2.09e4
23.89
  • 23.89
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.15e4
  • 2.15e4
21.68
  • 21.68
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.35e4
  • 2.35e4
14.24
  • 14.24
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires5 species5 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Theria10 species10 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000033352.

Cross-references

EnsemblENSRNOG00000033352 (S100a7a)
RGD1593779 (S100a7a)
EMBLAC097705, CH473976
Uniprot/SPTREMBLD3ZDM0, D3ZDM0_RAT

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