R. norvegicus Gene: Ccdc177 - ENSRNOG00000033973 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000033973
NameCcdc177
Descriptioncoiled-coil domain containing 177 [Source:RGD Symbol;Acc:1561115]
OrganismRattus norvegicus (rat)
Synonym(s)loc500686, rgd1561115
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
  • 1.45e4
55.39
  • 55.39
  • 47.00
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 2.21e4
53.16
  • 53.16
  • 19.54
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
  • 1.97e4
50.20
  • 50.20
  • 28.06
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
50.18
  • 50.18
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
47.35
  • 47.35
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
46.94
  • 46.94
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
46.79
  • 46.79
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
45.30
  • 45.30
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
43.30
  • 43.30
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.30
  • 39.30
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
38.05
  • 38.05
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
35.19
  • 35.19
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.84e4
  • 1.84e4
33.10
  • 33.10
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.84e4
  • 1.84e4
32.97
  • 32.97
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
31.64
  • 31.64
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.98e4
  • 1.98e4
27.71
  • 27.71
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.06e4
  • 2.06e4
25.06
  • 25.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Euarchontoglires5 species5 genesCompare expression
Boreoeutheria8 species8 genesCompare expression
Amniota10 species10 genesCompare expression
Tetrapoda11 species11 genesCompare expression
Euteleostomi12 species12 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000033973.

Cross-references

EnsemblENSRNOG00000033973 (Ccdc177)
RGD1561115 (Ccdc177)
EMBLAABR07065016
Uniprot/SPTREMBLD4A8V2, D4A8V2_RAT

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