R. norvegicus Gene: Bloc1s6 - ENSRNOG00000037160 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000037160
NameBloc1s6
Descriptionbiogenesis of lysosomal organelles complex-1, subunit 6, pallidin [Source:RGD Symbol;Acc:1310208]
OrganismRattus norvegicus (rat)
Synonym(s)loc317630, mgc114534, pldn

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.64e3
  • 4.64e3
82.66705
  • 82.66705
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
5.30e3
  • 5.30e3
80.21518
  • 80.21518
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.89e3
  • 5.89e3
77.98483
  • 77.98483
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.49e3
  • 6.49e3
75.74058
  • 75.74058
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
6.89e3
  • 6.89e3
74.26042
  • 74.26042
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.52e3
  • 7.52e3
71.91631
  • 71.91631
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.09e3
  • 8.09e3
69.79499
  • 69.79499
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
9.45e3
  • 9.45e3
64.69239
  • 64.69239
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
61.44310
  • 61.44310
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
  • 1.49e4
44.33788
  • 44.33788
  • 44.19194
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC097469, CH473949
EnsemblENSRNOG00000037160 (Bloc1s6)
RGD1310208 (Bloc1s6)
Uniprot/SWISSPROTBL1S6_RAT, Q4V8A6

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