R. norvegicus Gene: Bloc1s6 - ENSRNOG00000037160 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000037160
NameBloc1s6
Descriptionbiogenesis of lysosomal organelles complex-1, subunit 6, pallidin [Source:RGD Symbol;Acc:1310208]
OrganismRattus norvegicus (rat)
Synonym(s)loc317630, mgc114534, pldn

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
4.40e3
  • 4.40e3
83.94875
  • 83.94875
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.61e3
  • 4.61e3
83.19805
  • 83.19805
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.64e3
  • 4.64e3
83.07915
  • 83.07915
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
5.29e3
  • 5.29e3
80.70500
  • 80.70500
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
5.54e3
  • 5.54e3
79.80337
  • 79.80337
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.87e3
  • 5.87e3
78.58942
  • 78.58942
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
5.93e3
  • 5.93e3
78.37349
  • 78.37349
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
6.10e3
  • 6.10e3
77.75650
  • 77.75650
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.24e3
  • 6.24e3
77.23310
  • 77.23310
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.27e3
  • 6.27e3
77.13718
  • 77.13718
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.46e3
  • 6.46e3
  • 9.31e3
76.44162
  • 76.44162
  • 66.05741
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
6.53e3
  • 6.53e3
  • 6.59e3
76.17766
  • 76.17766
  • 75.97432
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.59e3
  • 6.59e3
75.96404
  • 75.96404
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.73e3
  • 6.73e3
75.44833
  • 75.44833
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.76e3
  • 6.76e3
75.36372
  • 75.36372
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.77e3
  • 6.77e3
  • 1.00e4
75.30000
  • 75.30000
  • 63.45184
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.52e3
  • 7.52e3
72.57931
  • 72.57931
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
7.76e3
  • 7.76e3
71.69909
  • 71.69909
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.09e3
  • 8.09e3
70.50600
  • 70.50600
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.11e3
  • 8.11e3
  • 9.68e3
70.42382
  • 70.42382
  • 64.68060
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
8.39e3
  • 8.39e3
69.41336
  • 69.41336
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
  • 1.52e4
44.60477
  • 44.60477
  • 44.45957
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC097469, CH473949
EnsemblENSRNOG00000037160 (Bloc1s6)
RGD1310208 (Bloc1s6)
Uniprot/SWISSPROTBL1S6_RAT, Q4V8A6

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