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R. norvegicus Gene: Ccdc77 - ENSRNOG00000037206 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000037206
NameCcdc77
Descriptioncoiled-coil domain containing 77 [Source:RGD Symbol;Acc:1310710]
OrganismRattus norvegicus (rat)
Synonym(s)loc312677, rgd1310710, rgd1310710_predicted
Orthologs(s)21 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.74e3
  • 4.74e3
  • 5.79e3
82.73
  • 82.73
  • 78.90
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.53e3
  • 5.53e3
79.86
  • 79.86
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
5.64e3
  • 5.64e3
79.45
  • 79.45
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
6.85e3
  • 6.85e3
75.04
  • 75.04
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.55e3
  • 7.55e3
72.52
  • 72.52
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.63e3
  • 7.63e3
72.20
  • 72.20
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
8.07e3
  • 8.07e3
70.62
  • 70.62
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.14e3
  • 8.14e3
70.34
  • 70.34
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
8.24e3
  • 8.24e3
69.98
  • 69.98
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
8.44e3
  • 8.44e3
69.24
  • 69.24
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.55e3
  • 8.55e3
68.85
  • 68.85
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.01e3
  • 9.01e3
67.17
  • 67.17
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
9.65e3
  • 9.65e3
  • 1.02e4
  • 1.10e4
64.83
  • 64.83
  • 62.84
  • 59.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
9.93e3
  • 9.93e3
63.83
  • 63.83
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.78
  • 61.78
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.53
  • 60.53
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.44
  • 60.44
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.79
  • 57.79
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.62
  • 57.62
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.35e4
54.96
  • 54.96
  • 50.73
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species20 genesCompare expression
Euteleostomi19 species21 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000037206.

Cross-references

EnsemblENSRNOG00000037206 (Ccdc77)
RGD1310710 (Ccdc77)
EMBLAABR07061907, CH473964
Uniprot/SPTREMBLD3ZHU5, D3ZHU5_RAT

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