We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

R. norvegicus Gene: Spata22 - ENSRNOG00000037307 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000037307
NameSpata22
Descriptionspermatogenesis associated 22 [Source:RGD Symbol;Acc:1565378]
OrganismRattus norvegicus (rat)
Synonym(s)loc360565, rgd1565378, sgn
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.22e3
  • 6.22e3
  • 8.60e3
77.36
  • 77.36
  • 68.67
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.87e3
  • 6.87e3
74.96
  • 74.96
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.62
  • 49.62
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
41.40
  • 41.40
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
41.26
  • 41.26
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
39.60
  • 39.60
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
  • 1.98e4
39.46
  • 39.46
  • 27.72
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
35.36
  • 35.36
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.84e4
  • 1.84e4
32.95
  • 32.95
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
27.51
  • 27.51
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.10e4
  • 2.10e4
23.41
  • 23.41
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.15e4
  • 2.15e4
21.61
  • 21.61
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.28e4
  • 2.28e4
16.90
  • 16.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000037307.

Cross-references

EnsemblENSRNOG00000037307 (Spata22)
RGD1565378 (Spata22)
EMBLAC126839
Uniprot/SPTREMBLD3ZKY9, D3ZKY9_RAT

Do not show this banner again