Gene: Mterf4 - ENSRNOG00000037376 - Rattus norvegicus (rat)

General information

Ensembl ID	ENSRNOG00000037376
Name	Mterf4
Description	mitochondrial transcription termination factor 4 [Source:RGD Symbol;Acc:1562440]
Organism	Rattus norvegicus (rat)
Synonym(s)	loc363289, mgc112635, mterfd2
Orthologs(s)	15 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	1.51e3 1.51e3 8.47e3	94.52 94.52 69.14	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	2.51e3 2.51e3 7.96e3	90.86 90.86 70.99	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 3 stages RnorDv:00000194-6-month-old stage (rat) UBERON:0000113post-juvenile adult stage UBERON:0034920infant stage	3.60e3 3.60e3 3.77e3 4.22e3	86.90 86.90 86.26 84.64	AEIR AEIR AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.09e3 4.09e3	85.11 85.11	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.15e3 4.15e3	84.90 84.90	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.16e3 4.16e3	84.85 84.85	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.38e3 4.38e3	84.04 84.04	AEIR AEIR
UBERON:0001377	quadriceps femoris	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.49e3 4.49e3	83.64 83.64	AEIR AEIR
UBERON:0001264	pancreas	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.51e3 4.51e3	83.58 83.58	AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.27e3 5.27e3	80.81 80.81	AEIR AEIR
UBERON:0002370	thymus	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.53e3 5.53e3	79.87 79.87	AEIR AEIR
UBERON:0002114	duodenum	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.62e3 5.62e3	79.53 79.53	AEIR AEIR
UBERON:0000945	stomach	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.20e3 6.20e3	77.41 77.41	AEIR AEIR
UBERON:0002116	ileum	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.43e3 6.43e3	76.60 76.60	AEIR AEIR
UBERON:0001155	colon	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.63e3 6.63e3	75.85 75.85	AEIR AEIR
UBERON:0002037	cerebellum	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.83e3 6.83e3	75.12 75.12	AEIR AEIR
UBERON:0002115	jejunum	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.10e3 7.10e3	74.14 74.14	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.12e3 7.12e3	74.08 74.08	AEIR AEIR
UBERON:0001870	frontal cortex	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	7.17e3 7.17e3 1.01e4	73.87 73.87 63.23	AEIR AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.19e3 7.19e3	73.81 73.81	AEIR AEIR
UBERON:0001043	esophagus	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.80e3 7.80e3	71.60 71.60	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Murinae	1 species Mus musculus (mouse)	1 gene ENSMUSG00000026273 Mterf4	Compare expression	[+]
Rodentia	2 species Mus musculus (mouse) Cavia porcellus (guinea pig)	2 genes ENSMUSG00000026273 Mterf4 ENSCPOG00000025700 MTERF4	Compare expression	[+]
Glires	3 species Mus musculus (mouse) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig)	3 genes ENSMUSG00000026273 Mterf4 ENSOCUG00000025170 MTERF4 ENSCPOG00000025700 MTERF4	Compare expression	[+]
Euarchontoglires	7 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig)	7 genes ENSG00000122085 MTERF4 ENSMUSG00000026273 Mterf4 ENSPTRG00000013116 MTERF4 ENSGGOG00000012783 MTERF4 ENSMMUG00000006835 MTERF4 ENSOCUG00000025170 MTERF4 ENSCPOG00000025700 MTERF4	Compare expression	[+]
Boreoeutheria	11 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Felis catus (cat) Cavia porcellus (guinea pig)	11 genes ENSG00000122085 MTERF4 ENSMUSG00000026273 Mterf4 ENSPTRG00000013116 MTERF4 ENSGGOG00000012783 MTERF4 ENSMMUG00000006835 MTERF4 ENSBTAG00000000784 MTERF4 ENSSSCG00000016380 MTERF4 ENSECAG00000011622 MTERF4 ENSOCUG00000025170 MTERF4 ENSFCAG00000010451 MTERF4 ENSCPOG00000025700 MTERF4	Compare expression	[+]
Mammalia	12 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Felis catus (cat) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus)	12 genes ENSG00000122085 MTERF4 ENSMUSG00000026273 Mterf4 ENSPTRG00000013116 MTERF4 ENSGGOG00000012783 MTERF4 ENSMMUG00000006835 MTERF4 ENSBTAG00000000784 MTERF4 ENSSSCG00000016380 MTERF4 ENSECAG00000011622 MTERF4 ENSOCUG00000025170 MTERF4 ENSFCAG00000010451 MTERF4 ENSCPOG00000025700 MTERF4 ENSOANG00000015611 MTERF4	Compare expression	[+]
Amniota	13 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Felis catus (cat) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Anolis carolinensis (green anole)	13 genes ENSG00000122085 MTERF4 ENSMUSG00000026273 Mterf4 ENSPTRG00000013116 MTERF4 ENSGGOG00000012783 MTERF4 ENSMMUG00000006835 MTERF4 ENSBTAG00000000784 MTERF4 ENSSSCG00000016380 MTERF4 ENSECAG00000011622 MTERF4 ENSOCUG00000025170 MTERF4 ENSFCAG00000010451 MTERF4 ENSCPOG00000025700 MTERF4 ENSOANG00000015611 MTERF4 ENSACAG00000002023 MTERF4	Compare expression	[+]
Tetrapoda	14 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Felis catus (cat) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	14 genes ENSG00000122085 MTERF4 ENSMUSG00000026273 Mterf4 ENSPTRG00000013116 MTERF4 ENSGGOG00000012783 MTERF4 ENSMMUG00000006835 MTERF4 ENSBTAG00000000784 MTERF4 ENSSSCG00000016380 MTERF4 ENSECAG00000011622 MTERF4 ENSOCUG00000025170 MTERF4 ENSFCAG00000010451 MTERF4 ENSCPOG00000025700 MTERF4 ENSOANG00000015611 MTERF4 ENSACAG00000002023 MTERF4 ENSXETG00000032078 MTERF4	Compare expression	[+]
Euteleostomi	15 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Felis catus (cat) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	15 genes ENSG00000122085 MTERF4 ENSMUSG00000026273 Mterf4 ENSDARG00000079124 MTERF4 ENSPTRG00000013116 MTERF4 ENSGGOG00000012783 MTERF4 ENSMMUG00000006835 MTERF4 ENSBTAG00000000784 MTERF4 ENSSSCG00000016380 MTERF4 ENSECAG00000011622 MTERF4 ENSOCUG00000025170 MTERF4 ENSFCAG00000010451 MTERF4 ENSCPOG00000025700 MTERF4 ENSOANG00000015611 MTERF4 ENSACAG00000002023 MTERF4 ENSXETG00000032078 MTERF4	Compare expression	[+]

Orthology information comes from OMA : ENSRNOG00000037376.

Cross-references

Ensembl	ENSRNOG00000037376 (Mterf4)
RGD	1562440 (Mterf4)
EMBL	BC098676
Uniprot/SWISSPROT	MTEF4_RAT, Q4G078