R. norvegicus Gene: Ufm1 - ENSRNOG00000038176 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000038176
NameUfm1
Descriptionubiquitin-fold modifier 1 [Source:RGD Symbol;Acc:1304890]
OrganismRattus norvegicus (rat)
Synonym(s)loc365797, mgc109501, rgd1304890

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
3.15e3
  • 3.15e3
88.23068
  • 88.23068
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.48e3
  • 3.48e3
87.01539
  • 87.01539
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.33e3
  • 4.33e3
83.82443
  • 83.82443
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.65e3
  • 4.65e3
82.62644
  • 82.62644
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.84e3
  • 4.84e3
81.93342
  • 81.93342
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.19e3
  • 5.19e3
80.62289
  • 80.62289
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
5.48e3
  • 5.48e3
  • 5.62e3
79.54465
  • 79.54465
  • 79.00306
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.75e3
  • 5.75e3
78.52754
  • 78.52754
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
9.24e3
  • 9.24e3
65.49372
  • 65.49372
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC091395
EnsemblENSRNOG00000038176 (Ufm1)
RGD1304890 (Ufm1)
Uniprot/SWISSPROTQ5BJP3, UFM1_RAT

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