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R. norvegicus Gene: Nhlrc4 - ENSRNOG00000039279 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000039279
NameNhlrc4
DescriptionNHL repeat containing 4 [Source:RGD Symbol;Acc:6503435]
OrganismRattus norvegicus (rat)
Synonym(s)loc100909527
Orthologs(s)8 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.77
  • 60.77
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.78
  • 45.78
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
40.14
  • 40.14
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.96e4
  • 1.96e4
28.64
  • 28.64
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.00e4
  • 2.00e4
27.26
  • 27.26
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.03e4
  • 2.03e4
25.92
  • 25.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.04e4
  • 2.04e4
  • 2.26e4
25.59
  • 25.59
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.07e4
  • 2.07e4
  • 2.08e4
24.73
  • 24.73
  • 24.19
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.11e4
  • 2.11e4
23.06
  • 23.06
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.16e4
  • 2.16e4
21.45
  • 21.45
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.16e4
  • 2.16e4
21.44
  • 21.44
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.21e4
  • 2.21e4
19.65
  • 19.65
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.24e4
  • 2.24e4
18.48
  • 18.48
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.26e4
  • 2.26e4
17.76
  • 17.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Euarchontoglires3 species3 genesCompare expression
Boreoeutheria6 species6 genesCompare expression
Amniota7 species7 genesCompare expression
Tetrapoda8 species8 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000039279.

Cross-references

EnsemblENSRNOG00000039279 (Nhlrc4)
RGD6503435 (Nhlrc4)
EMBLAC126071
Uniprot/SPTREMBLD3ZIR9, D3ZIR9_RAT

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