R. norvegicus Gene: Fam193b - ENSRNOG00000039807 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000039807
NameFam193b
Descriptionfamily with sequence similarity 193, member B [Source:RGD Symbol;Acc:1562335]
OrganismRattus norvegicus (rat)
Synonym(s)loc498703, rgd1562335, rgd1562335 {eco:0000313|embl:aai66819.1,gn eco:0000313|rgd:1562335}
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.84e3
  • 1.84e3
93.32
  • 93.32
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.93e3
  • 1.93e3
92.98
  • 92.98
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
3.30e3
  • 3.30e3
  • 5.15e3
  • 5.47e3
87.98
  • 87.98
  • 81.25
  • 80.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
3.77e3
  • 3.77e3
86.26
  • 86.26
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.82e3
  • 3.82e3
86.09
  • 86.09
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.85e3
  • 3.85e3
  • 4.26e3
85.98
  • 85.98
  • 84.47
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
4.24e3
  • 4.24e3
84.55
  • 84.55
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.36e3
  • 4.36e3
84.11
  • 84.11
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.51e3
  • 4.51e3
83.59
  • 83.59
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
5.02e3
  • 5.02e3
81.71
  • 81.71
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.41e3
  • 5.41e3
80.31
  • 80.31
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.49e3
  • 5.49e3
79.99
  • 79.99
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
5.95e3
  • 5.95e3
78.34
  • 78.34
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.25e3
  • 6.25e3
77.25
  • 77.25
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.35e3
  • 6.35e3
76.86
  • 76.86
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.42e3
  • 6.42e3
76.63
  • 76.63
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.48e3
  • 6.48e3
76.39
  • 76.39
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.85e3
  • 6.85e3
75.04
  • 75.04
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.97e3
  • 6.97e3
74.61
  • 74.61
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
9.26e3
  • 9.26e3
  • 9.36e3
66.28
  • 66.28
  • 65.89
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.17e4
61.39
  • 61.39
  • 57.33
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000039807.

Cross-references

EnsemblENSRNOG00000039807 (Fam193b)
RGD1562335 (Fam193b)
EMBLAC121413, AC139608, BC166819
Uniprot/SPTREMBLB2RYL2, B2RYL2_RAT, D3ZDR1, D3ZDR1_RAT

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