R. norvegicus Gene: Hdhd2 - ENSRNOG00000043171 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000043171
NameHdhd2
Descriptionhaloacid dehalogenase-like hydrolase domain containing 2 [Source:RGD Symbol;Acc:1308579]
OrganismRattus norvegicus (rat)
Synonym(s)ier3ip1, loc361351, lrrg00122, rgd1308579

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
811
  • 811
97.04563
  • 97.04563
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.56e3
  • 1.56e3
94.32874
  • 94.32874
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.75e3
  • 2.75e3
89.96944
  • 89.96944
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.89e3
  • 2.89e3
89.47985
  • 89.47985
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.04e3
  • 3.04e3
88.91170
  • 88.91170
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.61e3
  • 3.61e3
86.84568
  • 86.84568
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.79e3
  • 3.79e3
  • 4.35e3
86.19327
  • 86.19327
  • 84.14772
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.06e3
  • 4.06e3
  • 4.26e3
85.18806
  • 85.18806
  • 84.47678
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
4.11e3
  • 4.11e3
85.00084
  • 85.00084
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.27e3
  • 4.27e3
84.44305
  • 84.44305
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.29e3
  • 4.29e3
84.34650
  • 84.34650
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
4.41e3
  • 4.41e3
83.91173
  • 83.91173
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
4.41e3
  • 4.41e3
83.91082
  • 83.91082
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.48e3
  • 4.48e3
83.67513
  • 83.67513
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.77e3
  • 4.77e3
82.60200
  • 82.60200
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
4.80e3
  • 4.80e3
  • 5.03e3
82.49750
  • 82.49750
  • 81.66094
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.88e3
  • 4.88e3
82.18864
  • 82.18864
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.81e3
  • 5.81e3
78.82624
  • 78.82624
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.88e3
  • 5.88e3
  • 8.23e3
78.55940
  • 78.55940
  • 69.98213
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
6.47e3
  • 6.47e3
76.41872
  • 76.41872
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.16e4
  • 1.16e4
  • 1.16e4
57.59751
  • 57.59751
  • 57.52836
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07032600, AY539873, BC078941
EnsemblENSRNOG00000043171 (Hdhd2)
RGD1308579 (Hdhd2)
Uniprot/SPTREMBLQ6QI86, Q6QI86_RAT
Uniprot/SWISSPROTHDHD2_RAT, Q6AYR6

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