Gene: Clic5 - ENSRNOG00000047218 - Rattus norvegicus (rat)

General information

Ensembl ID	ENSRNOG00000047218
Name	Clic5
Description	chloride intracellular channel 5 [Source:RGD Symbol;Acc:620659]
Organism	Rattus norvegicus (rat)

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002048	lung	[+] 1 stage UBERON:0000113post-juvenile adult stage	141 141	99.49 99.49	AEIR AEIR
UBERON:0002115	jejunum	[+] 1 stage UBERON:0000113post-juvenile adult stage	716 716	97.39 97.39	AEIR AEIR
UBERON:0001377	quadriceps femoris	[+] 1 stage UBERON:0000113post-juvenile adult stage	763 763	97.22 97.22	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000113post-juvenile adult stage	780 780	97.16 97.16	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 1 stage UBERON:0000113post-juvenile adult stage	836 836	96.95 96.95	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.09e3 1.09e3	96.02 96.02	AEIR AEIR
UBERON:0002114	duodenum	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.18e3 1.18e3	95.70 95.70	AEIR AEIR
UBERON:0001043	esophagus	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.03e3 2.03e3	92.61 92.61	AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.78e3 2.78e3	89.87 89.87	AEIR AEIR
UBERON:0002116	ileum	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.09e3 4.09e3	85.08 85.08	AEIR AEIR
UBERON:0000473	testis	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	4.38e3 4.38e3 8.67e3	84.02 84.02 68.40	AEIR AEIR AEIR
UBERON:0001155	colon	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.10e3 5.10e3	81.39 81.39	AEIR AEIR
UBERON:0001264	pancreas	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.86e3 5.86e3	78.65 78.65	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	7.49e3 7.49e3 1.00e4	72.67 72.67 63.40	AEIR AEIR AEIR
UBERON:0000945	stomach	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.89e3 7.89e3	71.23 71.23	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000113post-juvenile adult stage	8.67e3 8.67e3	68.37 68.37	AEIR AEIR
UBERON:0001870	frontal cortex	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	8.98e3 8.98e3 9.92e3	67.24 67.24 63.81	AEIR AEIR AEIR
UBERON:0002037	cerebellum	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.07e4 1.07e4	61.11 61.11	AEIR AEIR
UBERON:0002370	thymus	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.14e4 1.14e4	58.50 58.50	AEIR AEIR
UBERON:0002107	liver	[+] 2 stages UBERON:0034920infant stage UBERON:0000113post-juvenile adult stage	1.25e4 1.25e4 1.27e4	54.49 54.49 53.71	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

EMBL	AF323174
Ensembl	ENSRNOG00000047218 (Clic5)
RGD	620659 (Clic5)
Uniprot/SWISSPROT	CLIC5_RAT, Q9EPT8