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R. norvegicus Gene: RGD1566359 - ENSRNOG00000047934 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000047934
NameRGD1566359
Descriptionsimilar to RIKEN cDNA B230219D22 [Source:RGD Symbol;Acc:1566359]
OrganismRattus norvegicus (rat)
Synonym(s)loc498701
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.39e3
  • 2.39e3
91.28
  • 91.28
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.52e3
  • 2.52e3
90.84
  • 90.84
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.65e3
  • 2.65e3
  • 4.77e3
90.35
  • 90.35
  • 82.64
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.73e3
  • 2.73e3
  • 5.16e3
90.06
  • 90.06
  • 81.21
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.09e3
  • 3.09e3
88.76
  • 88.76
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.16e3
  • 3.16e3
88.48
  • 88.48
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.46e3
  • 3.46e3
87.41
  • 87.41
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.48e3
  • 3.48e3
87.34
  • 87.34
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.93e3
  • 3.93e3
85.67
  • 85.67
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
3.97e3
  • 3.97e3
85.55
  • 85.55
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
4.10e3
  • 4.10e3
85.08
  • 85.08
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.16e3
  • 4.16e3
84.84
  • 84.84
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.23e3
  • 4.23e3
84.60
  • 84.60
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
4.40e3
  • 4.40e3
83.96
  • 83.96
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.42e3
  • 4.42e3
83.89
  • 83.89
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.00e3
  • 5.00e3
81.80
  • 81.80
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
5.18e3
  • 5.18e3
81.14
  • 81.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
5.69e3
  • 5.69e3
  • 5.83e3
  • 9.19e3
79.29
  • 79.29
  • 78.76
  • 66.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.11e3
  • 8.11e3
  • 9.34e3
70.46
  • 70.46
  • 65.96
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
63.51
  • 63.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000047934.

Cross-references

EnsemblENSRNOG00000047934 (RGD1566359)
RGD1566359 (RGD1566359)
EMBLAC139608, CH474032
Uniprot/SPTREMBLM0R469, M0R469_RAT

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