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R. norvegicus Gene: LOC103694107 - ENSRNOG00000048888 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000048888
NameLOC103694107
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 pseudogene [Source:RGD Symbol;Acc:9300452]
OrganismRattus norvegicus (rat)
Synonym(s)loc100362391
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.80e4
  • 1.80e4
34.31
  • 34.31
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.85e4
  • 1.85e4
32.74
  • 32.74
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.02e4
  • 2.02e4
26.26
  • 26.26
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.07e4
  • 2.07e4
24.68
  • 24.68
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
2.10e4
  • 2.10e4
  • 2.12e4
23.65
  • 23.65
  • 22.84
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.10e4
  • 2.10e4
  • 2.26e4
23.61
  • 23.61
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
2.21e4
  • 2.21e4
19.54
  • 19.54
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.21e4
  • 2.21e4
19.54
  • 19.54
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.27e4
  • 2.27e4
17.35
  • 17.35
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
2.33e4
  • 2.33e4
15.04
  • 15.04
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.35e4
  • 2.35e4
14.45
  • 14.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species9 genesCompare expression
Boreoeutheria12 species14 genesCompare expression
Mammalia13 species15 genesCompare expression
Amniota15 species17 genesCompare expression
Tetrapoda16 species18 genesCompare expression
Euteleostomi17 species19 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000048888.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Murinae1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000048888.

Cross-references

EnsemblENSRNOG00000048888 (LOC103694107)
RGD9300452 (LOC103694107)
EMBLAABR07060996
Uniprot/SPTREMBLM0RA24, M0RA24_RAT

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