We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

R. norvegicus Gene: Tceal6 - ENSRNOG00000049020 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000049020
NameTceal6
Descriptiontranscription elongation factor A (SII)-like 6 [Source:RGD Symbol;Acc:1598096]
OrganismRattus norvegicus (rat)
Synonym(s)loc102548415, loc501628, loc679974, rgd1562504, tceal3gn
Orthologs(s)29 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
640
  • 640
97.67
  • 97.67
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
762
  • 762
  • 1.16e3
97.23
  • 97.23
  • 95.76
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.99e3
  • 9.99e3
63.62
  • 63.62
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
57.99
  • 57.99
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.81
  • 53.81
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.58
  • 52.58
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
48.25
  • 48.25
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
47.70
  • 47.70
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
40.12
  • 40.12
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.21
  • 39.21
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.71e4
  • 1.71e4
37.83
  • 37.83
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.79e4
  • 1.79e4
34.64
  • 34.64
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.87e4
  • 1.87e4
31.75
  • 31.75
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.95e4
  • 1.95e4
  • 2.26e4
28.94
  • 28.94
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.97e4
  • 1.97e4
28.37
  • 28.37
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.97e4
  • 1.97e4
28.13
  • 28.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.19e4
  • 2.19e4
20.22
  • 20.22
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.26e4
  • 2.26e4
17.73
  • 17.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species2 genesCompare expression
Rodentia2 species5 genesCompare expression
Glires3 species7 genesCompare expression
Euarchontoglires6 species15 genesCompare expression
Boreoeutheria11 species29 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000049020.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Rodentia1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000049020.

Cross-references

EnsemblENSRNOG00000049020 (Tceal6)
RGD1562504 (Tceal3), 1598096 (Tceal6), 7639867 (LOC102548415)
EMBLAABR07009541, AABR07040678
Uniprot/SPTREMBLM0RBL8, M0RBL8_RAT

Do not show this banner again